The current behaviour of selected climate proxies in Lake Baikal was assessed by remote sensing analyses of 'Sea viewing Wide Field of view Sensor' (SeaWiFS) satellite data. Suitable proxies include optically visible water constituents such as phytoplankton, suspended terrigenous matter and yellow substance. These limnological parameters reflect the present-day climate bioproductivity and the river discharge in the catchment area. A biological and geochemical ground truth data set for Lake Baikal was established with the help of members of the paleoclimate project 'high-resolution CONTINENTal paleoclimate record in Lake Baikal' (CONTINENT). For processing the SeaWiFS satellite data, the atmospheric correction was adapted to the case of Lake Baikal. Chlorophyll as a proxy for phytoplankton was quantified using global NASA ocean colour algorithms OC2 and OC4. In cases of no optical interferences by terrigenous input, the calculated chlorophyll concentrations in clear pelagic waters were within ±30% accuracy with the CONTINENT cruise data during the summers of 2001 and 2002. Within this range of accuracy, the SeaWiFS time series will be able to show the seasonal variations of chlorophyll of specified bio-optical provinces of Lake Baikal and of CONTINENT sites. In this study, the suspended matter as a proxy for the terrigenous input was calculated according to an empirical algorithm using ground truth data in the time frame of flooding events in summer 2001. The approach chosen correlates the suspended matter concentration with the remotely sensed parameter of 'attenuation coefficient' to account for the organic-rich terrigenous input that originates from the swampy watersheds. Seasonal and spatial information that is provided by the analyses of the SeaWiFS satellite data will assist paleoclimate researchers to interpret the autochthonous and allochthonous influences at the CONTINENT coring sites. © 2004 Elsevier B.V. All rights reserved.